new files uploaded
I have uploaded the new files (with the same file names, though) to the DataONE plone folder.
June 16, 2011 – GEOROC data repository
This morning I finished finding the DOIs for the Data Collection Article for the GEOROC datasets. I did a trial search on Google Scholar with the search terms GEOROC8501 OR GEOROC 8501. However, after collecting 16 articles found by searching for the first 20 datasets, none actually cited the data. Continue reading June 16, 2011 – GEOROC data repository
Developing methodology and scope
Motivation for this project: There is a huge amount of data that exist and more is being produced every day. The number of journal articles and scientists are growing (Mabe and Amin, 2001) due to technology and it will be increasingly difficult to manage of all the data produced (Carlson, Continue reading Developing methodology and scope
Notes
Weekly updates are posted below.
Provenance Repository and Publishing Toolkit Project
Welcome to the DataONE Summer Internship project on Scientific Workflow Provenance. The goals of this project are to develop a provenance repository system for publishing and sharing data provenance collected from runs of a number of scientific workflow systems (Kepler, Taverna, Vistrails), together with a provenance trace publication system that allows Continue reading Provenance Repository and Publishing Toolkit Project
About Our Project
Scientific Workflow Provenance Repository and Publishing Toolkit Scientific workflow systems are increasingly used to automate scientific computations and data analysis and visualization pipelines. An important feature of scientific workflow systems is their ability to record and subsequently query and visualize provenance information. Provenance includes the processing history and lineage of Continue reading About Our Project
June 15, 2011 – Tracking GEO and finding DOIs
This morning I finished tagging GEO cited articles which can be seen this this Mendeley group. A total of 165 articles were found by searching Google Scholar for the GEO applied accesion numbers. The number of hits for each dataset can be seen from this Google Spreadsheet. Of the 165 Continue reading June 15, 2011 – Tracking GEO and finding DOIs
Notes
In an effort to understand the 3 repositories for this research I began to collect some notes. In particular they are based on some questions that I asked as I started which were formulated as a result of the overall goals of this project. Feel free to provide some input. Continue reading Notes
Ref software
Based on your last post, it sounds like you are an Endnote user? I suggest changing your software… there’s quite a few really great options for reference management these days. I just talked about this yesterday with Michelle and I think you could benefit too. If you aren’t familiar with Continue reading Ref software
student instruction
I made some modifications according to Carly’s comments. In my experience of teaching similar material in an infectious disease computer lab, the students should have learned about parasite aggregation and heard about poisson and negative binomial distributions. Nevertheless, it wouldn’t hurt to include some information in the instruction, or maybe Continue reading student instruction