Welcome to the 2017 Summer Internship Open Notebooks

We are excited to begin work with our 2017 cohort of summer interns across a range of projects.  Information about the projects can be found on our internship description page. Our interns will start recording their activities, experiences and results in this space starting May 2017.

[week 9] New and Emerging communities

This is the last day of my summer internship. It has been a superb experience. I’ve recieved very generous and professional help from mentors and many other members from DataONE community.  I am especially very grateful for Suzie and Dane. They keep encouraging me and providing guidance on everything. I’ve learned numerous Continue reading [week 9] New and Emerging communities

Week 8: New and Emerging Communities

So far we have six interviews recorded. I’m working on transcriptions now! Soon I’ll wrap up with this summer’s outputs. Conducted three researcher interviews and transcribed one interview. Contacted a list of authors of articles that are in our case studies spreadsheet. Documented more details in case selection method. Next Continue reading Week 8: New and Emerging Communities

Week 7: New and Emerging Communities

This week: Conducted one interviews and transcribed one interview. Contacted a list of authors of articles that are in our case studies spreadsheet. Two replied with interests. Documented more details in case selection method. Next step: Send out recruitment emails again to the ones that haven’t replied yet. Expand case Continue reading Week 7: New and Emerging Communities

Week 5: New/Emerging Communities

This week’s activities: Sent out first round recruitment to a list of people in Synthesis Centers. Contacted Amber for more potential participants. Expanded the list of case studies. Looked at member nodes such as USGS, NEON, KNB, LTER, etc. Updated bibliography with a series of papers on interdisciplinary collaboration. Next Continue reading Week 5: New/Emerging Communities

Week 8 : Reproducibility of Script-Based Workflows – Docker and ReproZip experiment

After a week concentrating on reproducing the LIGO script on docker and ReproZip experiment, I encountered some issues with “broke” data dependencies and software dependencies when running script on different platforms, but finally figured out how to solve them.I also made document about reproducibility in light of the system dependencies issues for deployment Continue reading Week 8 : Reproducibility of Script-Based Workflows – Docker and ReproZip experiment

Week 3: New/Emerging Communities- Case studies

The main tasks within this week are reading papers and looking for case studies. I looked through some cases of environmental health studies and documented the environmental data used. Most of the studies in the last five years have documented their data sources very clearly and most of the data Continue reading Week 3: New/Emerging Communities- Case studies