Earlier this month I was lucky enough to attend the Community Education and Engagement (CEE) working group meeting in Santa Barbara. There I met face-to-face with my primary mentor, Stacy Rebich Hespanha, as well as the other dedicated and knowledgeable members of the working group. From the many roundtable discussions, Continue reading Week 1 – Delving Into Data Stories
This week my focus was on meeting with my mentors, understanding my specific project requirements and gathering my datasets. My initial work was about creating a week-by-week plan to create a meaningful, generalizable ontology coverage tool for OWL ontologies. I spent some time looking over existing scripts and testing them Continue reading Gathering dataset
The DataONE summer 2013 internship program is underway and very soon, you can expect to see exciting developments blogged in place of this generic message.
Start 10:00 pm. Concatenate some previous notes. Reply received earlier in the day regarding appropriateness of UT CICS DataONE Sharepoint site for storing draft documents produced by UT. Relevant note from Dr. Davis regarding Sharepoint: Sharepoint is exactly the right place for this. It’s the place for all the DataONE work Continue reading May 29 Research Effort
Start 2:44 pm Tasks: Supply response to Dr. Davis re: spring 2013 UA SC Joint Working Group meeting – Block Three “Briefings for subgroup topics: status to date and deliverables from this meeting” http://epad.dataone.org/Sp13-SCUAwg-jtmt E-mail Dr. Davis re: storing working / draft document Plone or Sharepoint? End: 4:44 Total: 2 hours Continue reading May 28 Research Effort
sdf Research – May 24, 2013 Respond to inquiry from Dr. Davis Respond to inquiry about blog setup from Dr. Budden Remove .TIFF files from blog, replace with .PNG files Identify options for setting up personal mendeley account Identify options for setting up task management tie to open lab notebook Continue reading May 24 Research Effort
In my traditional paper notebook, I traditionally log an entry with the title “Research Effort” and the day’s date. For example, May 23, 2013 Research Effort. I tend to note the start time and end time for my record-keeping purposes. I also typically write down my general weekly objectives, and Continue reading Open Notebook Science – Task Lists
As I mentioned in my earlier post on open notebook science, this open lab notebook is inspired by Carl Boettiger’s Open Notebook. Carl’s open notebook migrated from OpenWetWare, which DataONE also experimented with, to WordPress, and ultimately to Jekyll. Carl does some interesting things in which he uses Flickr to Continue reading Open Notebook Science – Media Management
For the purposes of setting up this open notebook, I have an assigned category (data science). The category collects all of my unique blog entries into one collection: To organize information further, wordpress allows for the use of tags. Tags are separated with commas. Unfortunately, I do not have a Continue reading On Tagging
This entry is the first in a series of entries intended to facilitate open notebook science as part of a graduate research assistantship funded by DataONE. An open notebook is intended for the immediate communication of the results of scientific inquiry, among other things. All posts made by the author Continue reading Data Science Open Notebook